Publications

Abstract

June 17, 2021: Cerebral Venous Sinus Thrombosis is not Significantly Linked to COVID-19 Vaccines or Non-COVID vaccines in a Large Multi-State Health System via Journal of Stroke & Cerebrovascular Diseases

May 31, 2021: Antigenic minimalism of SARS-CoV-2 is linked to surges in COVID-19 community transmission and vaccine breakthrough infections via medRxiv

May 12, 2021: Building a best-in-class automated de-identification tool for electronic health records through ensemble learning via Patterns: Cell Press (originally posted in medRxiv February 23, 2021)

April 30, 2021: Real-world effectiveness of Ad26.COV2.S adenoviral vector vaccine for COVID-19 via medRxiv

April 23, 2021: Cerebral venous sinus thrombosis (CVST) is not significantly linked to COVID-19 vaccines or non-COVID vaccines in a large multi-state US health system via medRXivOSF Preprints

April 14, 2021: Effects of tumor mutation burden on the antigen presentation pathway via bioRXiv

April 13, 2021: Hair loss in females and thromboembolism in males are significantly enriched in post-acute sequelae of COVID (PASC) relative to recent medical history via medRxiv

April 7, 2021: Female-male differences in COVID vaccine adverse events have precedence in seasonal flu shots: a potential link to sex-associated baseline gene expression patterns via medRxiv

April 5, 2021: COVID-associated pediatric hospitalization and ICU admission trends across a multi-state health system and the broader US population via medRxiv

March 23, 2021: Pre-existing conditions are associated with COVID-19 patients' hospitalization, despite confirmed clearance of SARS-CoV-2 virus via Lancet eClinicalMedicine (originally posted in medRxiv November 3, 2020)

March 15, 2021: Plasma IL-6 levels following corticosteroid therapy as an indicator of ICU length of stay in critically ill COVID-19 patients via Nature Cell Death Discovery (originally posted in medRxiv July 3, 2020)

March 9, 2021: Enoxaparin is associated with lower rates of thrombosis, kidney injury, and mortality than unfractionated heparin in hospitalized COVID patients via Lancet eClinicalMedicine (originally posted in medRxiv October 11, 2020)

March 5, 2021: Healthcare disparities among anticoagulation therapies for severe COVID-19 patients in the multi-site VIRUS registry via Journal of Medical Virology (originally posted in medRxiv November 10, 2020)

February 27, 2021: FDA-authorized COVID-19 vaccines are effective per real-world evidence synthesized across a multi-state health system via medRxiv (originally posted in OSF Preprints February 17, 2021)

February 27, 2021: Real-time analysis of a mass vaccination effort via an Artificial Intelligence platform confirms the safety of FDA-authorized COVID-19 vaccines via medRxiv

February 26, 2021: Exploratory analysis of immunization records highlights decreased SARS-CoV-2 rates in individuals with recent non-COVID-19 vaccinations via Nature Scientific Reports (originally posted in medRxiv July 29, 2020)

January 19, 2021: Anemia prior to or during COVID-19 is a risk factor for rehospitalization after SARS-CoV-2 clearance via medRxiv

December 4, 2020: Mapping each pre-existing condition’s association to short-term and long-term COVID-19 complications via medRxiv

December 2, 2020: Long-term SARS-CoV-2 RNA shedding and its temporal association to IgG seropositivity via Nature Cell Death Discovery (originally posted in medRxiv July 7, 2020)

October 2, 2020: Benchmarking evolutionary tinkering underlying human–viral molecular mimicry shows multiple host pulmonary–arterial peptides mimicked by SARS-CoV-2 via Nature Cell Death Discovery

August 17, 2020: Inference from longitudinal laboratory tests characterizes temporal evolution of COVID-19-associated coagulopathy (CAC) via eLife

July 13, 2020: Human cancers express TRAILshort, a dominant negative TRAIL splice variant, which impairs immune effector cell killing of tumor cells via Clinical Cancer Research

May 28, 2020:  Knowledge synthesis of 100 million biomedical documents augments the deep expression profiling of coronavirus receptors via eLife (originally posted in bioRxiv March 29, 2020)

April 4, 2020: Real-time biomedical knowledge synthesis of the exponentially growing world wide web using unsupervised neural networks via bioRxiv

July 19, 2019: Patient segmentation using machine-learning based literature and genomic data synthesis uncovers novel cohorts of NSCLC and mesothelioma patients via Cancer Research

October 10, 2018: Neoantigenic Potential of Complex Chromosomal Rearrangements in Mesothelioma via Journal of Thoracic Oncology

May 12, 2021: Building a best-in-class automated de-identification tool for electronic health records through ensemble learning via Patterns: Cell Press (originally posted in medRxiv February 23, 2021)

March 15, 2021: Plasma IL-6 levels following corticosteroid therapy as an indicator of ICU length of stay in critically ill COVID-19 patients via Nature Cell Death Discovery (originally posted in medRxiv July 3, 2020)

March 9, 2021: Enoxaparin is associated with lower rates of thrombosis, kidney injury, and mortality than unfractionated heparin in hospitalized COVID patients via Lancet eClinicalMedicine (originally posted in medRxiv October 11, 2020)

March 5, 2021: Healthcare disparities among anticoagulation therapies for severe COVID-19 patients in the multi-site VIRUS registry via Journal of Medical Virology (originally posted in medRxiv November 10, 2020)

February 26, 2021: Exploratory analysis of immunization records highlights decreased SARS-CoV-2 rates in individuals with recent non-COVID-19 vaccinations via Nature Scientific Reports (originally posted in medRxiv July 29, 2020)

December 2, 2020: Long-term SARS-CoV-2 RNA shedding and its temporal association to IgG seropositivity via Nature Cell Death Discovery (originally posted in medRxiv July 7, 2020)

October 2, 2020: Benchmarking evolutionary tinkering underlying human–viral molecular mimicry shows multiple host pulmonary–arterial peptides mimicked by SARS-CoV-2 via Nature Cell Death Discovery

August 17, 2020: Inference from longitudinal laboratory tests characterizes temporal evolution of COVID-19-associated coagulopathy (CAC) via eLife

July 13, 2020: Human cancers express TRAILshort, a dominant negative TRAIL splice variant, which impairs immune effector cell killing of tumor cells via Clinical Cancer Research

May 28, 2020:  Knowledge synthesis of 100 million biomedical documents augments the deep expression profiling of coronavirus receptors via eLife (originally posted in bioRxiv March 29, 2020)

October 10, 2018: Neoantigenic Potential of Complex Chromosomal Rearrangements in Mesothelioma via Journal of Thoracic Oncology

May 31, 2021: Antigenic minimalism of SARS-CoV-2 is linked to surges in COVID-19 community transmission and vaccine breakthrough infections via medRxiv

April 30, 2021: Real-world effectiveness of Ad26.COV2.S adenoviral vector vaccine for COVID-19 via medRxiv

April 23, 2021: Cerebral venous sinus thrombosis (CVST) is not significantly linked to COVID-19 vaccines or non-COVID vaccines in a large multi-state US health system via medRXivOSF Preprints

April 14, 2021: Effects of tumor mutation burden on the antigen presentation pathway via bioRXiv

April 13, 2021: Hair loss in females and thromboembolism in males are significantly enriched in post-acute sequelae of COVID (PASC) relative to recent medical history via medRxiv

April 7, 2021: Female-male differences in COVID vaccine adverse events have precedence in seasonal flu shots: a potential link to sex-associated baseline gene expression patterns via medRxiv

April 5, 2021: COVID-associated pediatric hospitalization and ICU admission trends across a multi-state health system and the broader US population via medRxiv

February 27, 2021: FDA-authorized COVID-19 vaccines are effective per real-world evidence synthesized across a multi-state health system via medRxiv (originally posted in OSF Preprints February 17, 2021)

February 27, 2021: Real-time analysis of a mass vaccination effort via an Artificial Intelligence platform confirms the safety of FDA-authorized COVID-19 vaccines via medRxiv

January 19, 2021: Anemia prior to or during COVID-19 is a risk factor for rehospitalization after SARS-CoV-2 clearance via medRxiv

December 4, 2020: Mapping each pre-existing condition’s association to short-term and long-term COVID-19 complications via medRxiv

April 4, 2020: Real-time biomedical knowledge synthesis of the exponentially growing world wide web using unsupervised neural networks via bioRxiv

July 19, 2019: Patient segmentation using machine-learning based literature and genomic data synthesis uncovers novel cohorts of NSCLC and mesothelioma patients via Cancer Research